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1

The transcriptome of retinal Müller glial cells

Karin Roesch, Ashutosh P. Jadhav, Jeffrey M. Trimarchi, Michael B. Stadler, Botond Roska, Ben B. Sun, Constance L. Cepko

Journal:

The Journal of Comparative Neurology

Year:

2008

Language:

english

File:

PDF, 4.33 MB

english, 2008

2

Molecular heterogeneity of developing retinal ganglion and amacrine cells revealed through single cell gene expression profiling

Jeffrey M. Trimarchi, Michael B. Stadler, Botond Roska, Nathan Billings, Ben Sun, Brandon Bartch, Constance L. Cepko

Journal:

The Journal of Comparative Neurology

Year:

2007

Language:

english

File:

PDF, 14.65 MB

english, 2007

3

Polo-Like Kinase 3 Appears Dispensable for Normal Retinal Development Despite Robust Embryonic Expression

Goetz, Jillian J., Laboissonniere, Lauren A., Wester, Andrea K., Lynch, Madison R., Trimarchi, Jeffrey M., Kihara, Alexandre Hiroaki

Journal:

Year:

2016

Language:

english

File:

PDF, 30.29 MB

english, 2016

4

Genetic alterations in the RAS/RAF/mitogen-activated protein kinase and phosphatidylinositol 3-kinase/Akt signaling pathways in the follicular variant of papillary thyroid carcinoma

Libero Santarpia, Jeffrey N. Myers, Steven I. Sherman, Francesco Trimarchi, Gary L. Clayman, Adel K. El-Naggar

Journal:

Year:

2010

Language:

english

File:

PDF, 284 KB

english, 2010

5

Identification of molecular markers of bipolar cells in the murine retina

Douglas S. Kim, Sarah E. Ross, Jeffrey M. Trimarchi, John Aach, Michael E. Greenberg, Constance L. Cepko

Journal:

The Journal of Comparative Neurology

Year:

2008

Language:

english

File:

PDF, 4.25 MB

english, 2008

6

Identification of genes expressed preferentially in the developing peripheral margin of the optic cup

Jeffrey M. Trimarchi, Seo-Hee Cho, Constance L. Cepko

Journal:

Developmental Dynamics

Year:

2009

Language:

english

File:

PDF, 1.55 MB

english, 2009

7

Thyroid hormone components are expressed in three sequential waves during development of the chick retina

Jeffrey M Trimarchi, Sanjiv Harpavat, Nathan A Billings, Constance L Cepko

Journal:

BMC Developmental Biology

Year:

2008

Language:

english

File:

PDF, 3.73 MB

english, 2008

8

TRANSCRIPTIONSIBLING RIVALRY IN THE E2F FAMILY

Trimarchi, Jeffrey M., Lees, Jacqueline A.

Journal:

Nature Reviews Molecular Cell Biology

Year:

2002

Language:

english

File:

PDF, 1.01 MB

english, 2002

9

Transcriptome sequencing of single cells with Smart-Seq

Goetz, Jillian J, Trimarchi, Jeffrey M

Journal:

Nature Biotechnology

Year:

2012

Language:

english

File:

PDF, 237 KB

english, 2012

10

PS30. Spiral and Non-Spiral Type B Dissections: Thrombosis and Aortic Growth Rates

Jasper W. van Keulen, Hamid Mojibian, Joost A. van Herwaarden, Santi Trimarchi, Jeffrey Indes, Frans L. Moll, Bart E. Muhs

Journal:

Journal of Vascular Surgery

Year:

2011

Language:

english

File:

PDF, 57 KB

english, 2011

11

E2F4 Is Essential for Normal Erythrocyte Maturation and Neonatal Viability

Patrick O. Humbert, Catherine Rogers, Soula Ganiatsas, Rebecca L. Landsberg, Jeffrey M. Trimarchi, Savita Dandapani, Carlo Brugnara, Susan Erdman, Mark Schrenzel, Roderick T. Bronson, Jacqueline A. Le

Journal:

Year:

2000

Language:

english

File:

PDF, 544 KB

english, 2000

12

Otx2 and Onecut1 Promote the Fates of Cone Photoreceptors and Horizontal Cells and Repress Rod Photoreceptors

Emerson, Mark M., Surzenko, Natalia, Goetz, Jillian J., Trimarchi, Jeffrey, Cepko, Constance L.

Journal:

Developmental Cell

Year:

2013

Language:

english

File:

PDF, 4.97 MB

english, 2013

13

E2F-6, a Member of the E2F Family that can Behave as a Transcriptional Repressor

Jeffrey M. Trimarchi, Brian Fairchild, Raluca Verona, Ken Moberg, Nancy Andon and Jacqueline A. Lees

Journal:

Proceedings of the National Academy of Sciences

Year:

1998

Language:

english

File:

PDF, 1.67 MB

english, 1998

14

Plasma-seq: a novel strategy for metastatic prostate cancer analysis

Caitlin Farris,Jeffrey M Trimarchi

Journal:

Genome Medicine

Year:

2013

Language:

english

File:

PDF, 160 KB

english, 2013

15

Analysis of gene expression in wild-type and Notch1 mutant retinal cells by single cell profiling

Mizeracka, Karolina, Trimarchi, Jeffrey M., Stadler, Michael B., Cepko, Constance L.

Journal:

Developmental Dynamics

Year:

2013

Language:

english

File:

PDF, 1.12 MB

english, 2013

16

Adaptive Reversion of an Episomal Frameshift Mutation in Escherichia coli Requires Conjugal Functions but not Actual Conjugation

Patricia L. Foster and Jeffrey M. Trimarchi

Journal:

Proceedings of the National Academy of Sciences

Year:

1995

Language:

english

File:

PDF, 739 KB

english, 1995

17

Transcriptomic analyses of Onecut1 and Onecut2 deficient retinas

Goetz, Jillian J., Trimarchi, Jeffrey M.

Journal:

Year:

2015

Language:

english

File:

PDF, 151 KB

english, 2015

18

Proofreading-Defective DNA Polymerase II Increases Adaptive Mutation in Escherichia coli

Patricia L. Foster, Gudmundur Gudmundsson, Jeffrey M. Trimarchi, Hong Cai and Myron F. Goodman

Journal:

Proceedings of the National Academy of Sciences

Year:

1995

Language:

english

File:

PDF, 917 KB

english, 1995

19

Expression Profiling of Developing Zebrafish Retinal Cells

Mullally, Madelyn, Albrecht, Caitlin, Horton, Mary, Laboissonniere, Lauren A., Goetz, Jillian J., Chowdhury, Rebecca, Manning, Alicia, Wester, Andrea K., Bose, Quinton, Trimarchi, Jeffrey M.

Journal:

Year:

2016

Language:

english

File:

PDF, 978 KB

english, 2016

20

Transplantation of iPSC-derived TM cells rescues glaucoma phenotypes in vivo

Zhu, Wei, Gramlich, Oliver W., Laboissonniere, Lauren, Jain, Ankur, Sheffield, Val C., Trimarchi, Jeffrey M., Tucker, Budd A., Kuehn, Markus H.

Journal:

Proceedings of the National Academy of Sciences

Year:

2016

Language:

english

File:

PDF, 1.65 MB

english, 2016

21

Disentangling neural cell diversity using single-cell transcriptomics

Poulin, Jean-Francois, Tasic, Bosiljka, Hjerling-Leffler, Jens, Trimarchi, Jeffrey M, Awatramani, Rajeshwar

Journal:

Nature Neuroscience

Year:

2016

Language:

english

File:

PDF, 4.10 MB

english, 2016

22

Complementary feature selection from alternative splicing events and gene expression for phenotype prediction

Labuzzetta, Charles J., Antonio, Margaret L., Watson, Patricia M., Wilson, Robert C., Laboissonniere, Lauren A., Trimarchi, Jeffrey M., Genc, Baris, Ozdinler, P. Hande, Watson, Dennis K., Anderson, Pa

Journal:

Year:

2016

Language:

english

File:

PDF, 324 KB

english, 2016

23

Single cell transcriptome profiling of developing chick retinal cells

Laboissonniere, Lauren A, Martin, Gregory M, Goetz, Jillian J, Bi, Ran, Pope, Brock, Weinand, Kallie, Ellson, Laura, Fru, Diane, Lee, Miranda, Wester, Andrea K, Liu, Peng, Trimarchi, Jeffrey M

Journal:

The Journal of Comparative Neurology

Year:

2017

Language:

english

File:

PDF, 3.46 MB

english, 2017

24

Single-cell RNA-Seq of Defined Subsets of Retinal Ganglion Cells

Laboissonniere, Lauren A., Sonoda, Takuma, Lee, Seul Ki, Trimarchi, Jeffrey M., Schmidt, Tiffany M.

Journal:

Journal of Visualized Experiments

Year:

2017

Language:

english

File:

PDF, 833 KB

english, 2017

25

Single-cell Profiling of Developing and Mature Retinal Neurons

Goetz, Jillian J., Trimarchi, Jeffrey M.

Journal:

Journal of Visualized Experiments

Year:

2012

Language:

english

File:

PDF, 462 KB

english, 2012

26

Individual Retinal Progenitor Cells Display Extensive Heterogeneity of Gene Expression

Trimarchi, Jeffrey M., Stadler, Michael B., Cepko, Constance L., Callaerts, Patrick

Journal:

Year:

2008

Language:

english

File:

PDF, 4.24 MB

english, 2008

27

Loss of Gq/11 Genes Does Not Abolish Melanopsin Phototransduction

Chew, Kylie S., Schmidt, Tiffany M., Rupp, Alan C., Kofuji, Paulo, Trimarchi, Jeffrey M., Fox, Michael A.

Journal:

Year:

2014

Language:

english

File:

PDF, 1.98 MB

english, 2014

28

Onecut1 and Onecut2 Play Critical Roles in the Development of the Mouse Retina

Goetz, Jillian J., Martin, Gregory M., Chowdhury, Rebecca, Trimarchi, Jeffrey M., Kihara, Alexandre H.

Journal:

Year:

2014

Language:

english

File:

PDF, 15.02 MB

english, 2014

29

The Trim family of genes and the retina: Expression and functional characterization

Chowdhury, Rebecca, Laboissonniere, Lauren A., Wester, Andrea K., Muller, Madison, Trimarchi, Jeffrey M., Agudo-Barriuso, Marta

Journal:

Year:

2018

Language:

english

File:

PDF, 15.08 MB

english, 2018

30

Genetic, Inflammatory, and Epithelial Cell Differentiation Factors Control Expression of Human Calpain-14

Miller, Daniel E., Forney, Carmy, Rochman, Mark, Cranert, Stacey, Habel, Jeffery, Rymer, Jeffrey, Lynch, Arthur, Schroeder, Connor, Lee, Josh, Sauder, Amber, Smith, Quinton, Chawla, Mehak, Trimarchi,

Journal:

G3 Genes|Genome|Genetics

Year:

2019

File:

PDF, 1.01 MB

2019

31

Repeated evolution of eye loss in Mexican cavefish: Evidence of similar developmental mechanisms in independently evolved populations

SifuentesâRomero, Itzel, Ferrufino, Estephany, Thakur, Sunishka, Laboissonniere, Lauren A., Solomon, Michael, Smith, Courtney L., Keene, Alex C., Trimarchi, Jeffrey M., Kowalko, Johanna E.

Journal:

Journal of Experimental Zoology Part B: Molecular and Developmental Evolution

Year:

2020

File:

PDF, 3.93 MB

2020

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